Find group of modules
Find group of modules based on shared genes
Either a list of modules or character vector.
Which module set to use. Either a character vector ("LI", "DC" or "all", default: all) or an object of class tmod (see "Custom module definitions" below)
Minimum number of overlapping items if stat == number, minimum jaccard index if stat == jaccard etc.
Type of statistics to return. "jaccard": Jaccard index (default); "number": number of common genes; "soerensen": Soerensen-Dice coefficient; "overlap": Szymkiewicz-Simpson coefficient.
Split the modules into groups based on the overlapping items.
The first argument, modules, is either a character vector of module identifiers from `mset` (NULL mset indicates the default mset of tmod) or a list. If it is a list, then each element is assumed to be a character vector with module IDs.